PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS727258.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 219aa    MW: 25384.9 Da    PI: 7.8103
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS727258.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-133688155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                  r+++h e+Er+RR+++ s f  Lr+ lP  +   ++K s ++   +Av+YIk+Lq
  EcS727258.10 36 RKKKHREIERQRRQELASLFTSLRSKLPLEF--IKGKRSMSDYMNEAVNYIKHLQ 88
                  7899*************************65..*********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-1533103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.7833587IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.54E-113692No hitNo description
PfamPF000101.2E-103688IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1136103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-54193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
METSNAIFKV VEDQRRRFSV TNYNKRTGED DDHGGRKKKH REIERQRRQE LASLFTSLRS  60
KLPLEFIKGK RSMSDYMNEA VNYIKHLQTK IRELSFKKDE LKSIHSLANL DSPSSDSSGL  120
TIFTVNSCCE SVEIVISRSI REKDLLLSTV LELLLQHGLD VVSCFSCQVN DRVLHTIHCE  180
LVSNLSNIYF RCADSHGYCQ SLYISFAFFW AEPFIQYDL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010061807.11e-128PREDICTED: transcription factor bHLH36-like
RefseqXP_010061811.11e-128PREDICTED: transcription factor bHLH36-like
TrEMBLA0A059DK502e-79A0A059DK50_EUCGR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29682767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.12e-32bHLH family protein